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  5. AMTR_s00103p00104550

AMTR_s00103p00104550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.58

Description : Protein OBERON 4 OS=Arabidopsis thaliana


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00104550

Target Alias Description ECC score Gene Family Method Actions
AT5G48160 OBE2 Protein of unknown function (DUF1423) 0.04 OrthoFinder output from all 47 species
Adi_g112659 OBE1 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Adi_g122453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06624 OBE1 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Als_g23885 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Als_g52234 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aop_g23907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04108.t1 Aspi01Gene04108 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10941.t1 Aspi01Gene10941 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30216.t1 OBE2, Aspi01Gene30216 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50566.t1 OBE2, Aspi01Gene50566 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Cba_g20827 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g77484 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ceric.22G032700.1 Ceric.22G032700 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Dac_g10938 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Dac_g20877 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06398 OBE2 transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g22990 No alias transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Dde_g02398 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02961 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g03782 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07963 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011608001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032137001 No alias Protein OBERON 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_21164 No alias Protein OBERON 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g11890.1 LOC_Os03g11890 Protein OBERON 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g13590.1 LOC_Os03g13590 no description available(sp|q10pc5|tta1_orysj : 1188.0) 0.05 OrthoFinder output from all 47 species
LOC_Os12g32980.1 OBE2, LOC_Os12g32980 OBERON-like protein OS=Nicotiana benthamiana... 0.06 OrthoFinder output from all 47 species
Len_g09574 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Len_g24702 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g05552 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06084 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g06272 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
MA_214119g0010 No alias Protein OBERON 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g14429 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ore_g10796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g36663 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Pir_g41442 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g27832 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03975 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g62258 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015578 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Smo158800 OBE2 OBERON-like protein OS=Nicotiana benthamiana 0.02 OrthoFinder output from all 47 species
Solyc01g087490.4.1 Solyc01g087490 Protein OBERON 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g018500.3.1 Solyc05g018500 Protein OBERON 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc07g047780.3.1 OBE2, Solyc07g047780 OBERON-like protein OS=Nicotiana benthamiana... 0.04 OrthoFinder output from all 47 species
Tin_g01081 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e011323_P001 OBE2, Zm00001e011323 OBERON-like protein OS=Nicotiana benthamiana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR004082 OBERON 866 1311
No external refs found!