AMTR_s00103p00095210 (SMT1, CPH,...)

Aliases : SMT1, CPH, evm_27.TU.AmTr_v1.0_scaffold00103.51

Description : Lipid metabolism.phytosterols.campesterol synthesis.sterol C-24 methyltransferase

Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00103p00095210

Target	Alias	Description	ECC score	Gene Family Method
AT1G76090	SMT3	sterol methyltransferase 3	0.03	OrthoFinder output from all 47 species
Aop_g01656	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aop_g18802	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.06	OrthoFinder output from all 47 species
Aspi01Gene27315.t1	SMT2, FRL1,...	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Cre12.g500500	SMT3	Lipid metabolism.phytosterols.campesterol...	0.02	OrthoFinder output from all 47 species
Dac_g25896	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
LOC_Os03g04340.1	SMT2, FRL1,...	sterol C-24 methyltransferase	0.02	OrthoFinder output from all 47 species
Len_g35072	SMT2, FRL1, CVP1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Lfl_g03786	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Lfl_g18515	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Pir_g01894	SMT2, FRL1, CVP1	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Pir_g07811	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008662	SMT2, FRL1, CVP1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	IEA	Interproscan
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013705	Sterol_MeTrfase_C	277	342
IPR013216	Methyltransf_11	105	199

External Links

No external refs found!

AMTR_s00103p00095210 (SMT1, CPH,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation