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  5. AMTR_s00103p00067500

AMTR_s00103p00067500 (TIC,...)


Aliases : TIC, evm_27.TU.AmTr_v1.0_scaffold00103.34

Description : Multi-process regulation.circadian clock.TIC circadian clock regulator


Gene families : OG0000917 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00067500

Target Alias Description ECC score Gene Family Method Actions
Adi_g020052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24227 No alias regulatory protein *(TIC) of circadian clock & original... 0.02 OrthoFinder output from all 47 species
Aob_g32955 No alias regulatory protein *(TIC) of circadian clock & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013810 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Dcu_g45949 No alias regulatory protein *(TIC) of circadian clock & original... 0.02 OrthoFinder output from all 47 species
Ehy_g16139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01001149001 TIC Multi-process regulation.circadian clock.TIC circadian... 0.03 OrthoFinder output from all 47 species
GSVIVT01017938001 TIC Multi-process regulation.circadian clock.TIC circadian... 0.03 OrthoFinder output from all 47 species
LOC_Os07g38360.2 TIC, LOC_Os07g38360 circadian clock regulator (TIC) 0.02 OrthoFinder output from all 47 species
Len_g30742 No alias regulatory protein *(TIC) of circadian clock & original... 0.02 OrthoFinder output from all 47 species
Len_g37593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24421 No alias regulatory protein *(TIC) of circadian clock & original... 0.02 OrthoFinder output from all 47 species
Mp4g11470.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g38965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37115 TIC regulatory protein *(TIC) of circadian clock & original... 0.02 OrthoFinder output from all 47 species
Pnu_g13295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011699 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Solyc09g075830.3.1 TIC, Solyc09g075830 circadian clock regulator (TIC) 0.04 OrthoFinder output from all 47 species
Spa_g39383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56228 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Zm00001e035306_P001 TIC, Zm00001e035306 circadian clock regulator (TIC) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0003933 GTP cyclohydrolase activity IEP HCCA
MF GO:0003935 GTP cyclohydrolase II activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!