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  5. AMTR_s00102p00091820

AMTR_s00102p00091820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00102.47

No description available


Gene families : OG0009329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009329_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00102p00091820
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aop_g10838 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene25996.t2 Aspi01Gene25996 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G068800.1 Ceric.22G068800 not classified & original description: pacid=50614476... 0.04 OrthoFinder output from all 47 species
Dcu_g31704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029086001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_15327 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10436070g0040 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g30435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g42226 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g42557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10124 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e004600_P002 Zm00001e004600 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030337 DNA polymerase processivity factor activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0043626 PCNA complex IEP HCCA
CC GO:0044796 DNA polymerase processivity factor complex IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:0150005 enzyme activator complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!