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  5. AMTR_s00101p00077050

AMTR_s00101p00077050 (CAC2,...)


Aliases : CAC2, evm_27.TU.AmTr_v1.0_scaffold00101.55

Description : Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.biotin carboxylase subunit


Gene families : OG0001087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00101p00077050
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT5G35360 CAC2 acetyl Co-enzyme a carboxylase biotin carboxylase subunit 0.14 OrthoFinder output from all 47 species
Aob_g03198 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g04688 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Aop_g05185 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s3264.g115124 No alias not classified & original description: CDS=1-252 0.02 OrthoFinder output from all 47 species
Cba_g21594 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G084300.1 CAC2, Ceric.06G084300 EC_6.4 ligase forming carbon-carbon bond & original... 0.13 OrthoFinder output from all 47 species
Ceric.34G002700.1 CAC2, Ceric.34G002700 EC_6.4 ligase forming carbon-carbon bond & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000133.42 CAC2 Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000133.43 CAC2 Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.01 OrthoFinder output from all 47 species
Cre08.g359350 CAC2 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.09 OrthoFinder output from all 47 species
GSVIVT01032257001 CAC2 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.05 OrthoFinder output from all 47 species
Gb_20361 CAC2 biotin carboxylase subunit of polymeric acetyl-CoA... 0.09 OrthoFinder output from all 47 species
Len_g03306 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
MA_10434662g0020 CAC2 Biotin carboxylase 1, chloroplastic OS=Populus... 0.04 OrthoFinder output from all 47 species
MA_8514g0010 CAC2 Biotin carboxylase 1, chloroplastic OS=Populus... 0.06 OrthoFinder output from all 47 species
Mp6g09060.1 CAC2 biotin carboxylase subunit of polymeric acetyl-CoA... 0.05 OrthoFinder output from all 47 species
Msp_g06625 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g13511 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Pnu_g08042 MCCA EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Pp3c8_7840V3.1 CAC2, Pp3c8_7840 acetyl Co-enzyme a carboxylase biotin carboxylase subunit 0.03 OrthoFinder output from all 47 species
Sam_g08461 No alias EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Solyc01g008330.4.1 CAC2, Solyc01g008330 biotin carboxylase subunit of polymeric acetyl-CoA... 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016874 ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005481 BC-like_N 57 164
IPR005482 Biotin_COase_C 390 495
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 169 376
No external refs found!