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  5. AMTR_s00100p00151380

AMTR_s00100p00151380 (MSI1, MEE70, ATMSI1,...)


Aliases : MSI1, MEE70, ATMSI1, evm_27.TU.AmTr_v1.0_scaffold00100.59

Description : WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum


Gene families : OG0001615 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00100p00151380
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene28982.t2 MSI1, MEE70,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04205 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 155 188
IPR001680 WD40_repeat 105 139
IPR022052 Histone-bd_RBBP4_N 22 81
No external refs found!