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  5. AMTR_s00100p00142990

AMTR_s00100p00142990 (MSI1, MEE70, ATMSI1,...)


Aliases : MSI1, MEE70, ATMSI1, evm_27.TU.AmTr_v1.0_scaffold00100.52

Description : Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1c/MSI component


Gene families : OG0001615 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00100p00142990

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene49647.t1 MSI1, MEE70,... component *(MSI1) of PRC2 histone methylation complex &... 0.01 OrthoFinder output from all 47 species
Dcu_g02798 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.05 OrthoFinder output from all 47 species
Smo431142 MSI1, MEE70, ATMSI1 Histone-binding protein MSI1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 159 193
IPR001680 WD40_repeat 206 242
IPR022052 Histone-bd_RBBP4_N 22 89
No external refs found!