AMTR_s00099p00128180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.113

Description : B2 protein OS=Daucus carota


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00128180

Target Alias Description ECC score Gene Family Method Actions
AT3G11000 No alias DCD (Development and Cell Death) domain protein 0.03 OrthoFinder output from all 47 species
Adi_g007845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46826 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g01503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g60044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48151.t1 Aspi01Gene48151 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013844 No alias not classified & original description: CDS=158-3016 0.02 OrthoFinder output from all 47 species
Azfi_s0087.g042328 No alias not classified & original description: CDS=434-1552 0.03 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G040700.1 Ceric.18G040700 not classified & original description: pacid=50621172... 0.04 OrthoFinder output from all 47 species
Ceric.24G054900.1 Ceric.24G054900 not classified & original description: pacid=50628695... 0.02 OrthoFinder output from all 47 species
Dcu_g13536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10275 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 97.4) 0.03 OrthoFinder output from all 47 species
Gb_16287 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 93.2) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.03 OrthoFinder output from all 47 species
Len_g12406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429587g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.8) 0.03 OrthoFinder output from all 47 species
MA_184449g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.04 OrthoFinder output from all 47 species
Msp_g00996 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g31430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020106 No alias not classified & original description: CDS=1-1200 0.03 OrthoFinder output from all 47 species
Solyc06g050610.3.1 Solyc06g050610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 102.0) 0.03 OrthoFinder output from all 47 species
Solyc10g076330.3.1 Solyc10g076330 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0) 0.04 OrthoFinder output from all 47 species
Zm00001e011644_P004 Zm00001e011644 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 267.0) 0.01 OrthoFinder output from all 47 species
Zm00001e031085_P001 Zm00001e031085 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 113.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 101 229
No external refs found!