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  5. AMTR_s00098p00154060

AMTR_s00098p00154060 (PQL1, PQL2,...)


Aliases : PQL1, PQL2, evm_27.TU.AmTr_v1.0_scaffold00098.43

Description : Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.PnsL3/PQL2 component


Gene families : OG0002352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00098p00154060
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT1G14150 PQL1, PQL2 PsbQ-like 2 0.12 OrthoFinder output from all 47 species
AT3G01440 PQL1, PQL2 PsbQ-like 1 0.07 OrthoFinder output from all 47 species
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.14 OrthoFinder output from all 47 species
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.17 OrthoFinder output from all 47 species
Adi_g009979 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.14 OrthoFinder output from all 47 species
Adi_g043833 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.13 OrthoFinder output from all 47 species
Aev_g03646 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Aev_g03692 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Aev_g43790 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Ala_g00903 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.08 OrthoFinder output from all 47 species
Als_g02853 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Als_g13839 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Aob_g17131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26540 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.08 OrthoFinder output from all 47 species
Aob_g42251 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09540 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Aspi01Gene30436.t1 PSBQ-2, PSII-Q,... component *(PsbQ) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene32193.t1 PSBQ-2, PSII-Q,... component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Azfi_s0199.g057486 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Cba_g02399 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Cba_g63796 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ceric.07G029100.1 PSBQ-2, PSII-Q,... component *(PsbQ) of PS-II oxygen-evolving center &... 0.17 OrthoFinder output from all 47 species
Cre08.g372450 PSBQA, PSBQ-1, PSBQ Oxygen-evolving enhancer protein 3, chloroplastic... 0.08 OrthoFinder output from all 47 species
Dac_g01297 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Dcu_g03585 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Dcu_g41298 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.13 OrthoFinder output from all 47 species
Dde_g06282 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.12 OrthoFinder output from all 47 species
Ehy_g15147 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.13 OrthoFinder output from all 47 species
GSVIVT01002809001 PSBQ-2, PSII-Q, PSBQ Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.14 OrthoFinder output from all 47 species
GSVIVT01014586001 PQL1, PQL2 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 OrthoFinder output from all 47 species
GSVIVT01019955001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.11 OrthoFinder output from all 47 species
Gb_04734 PSBQ-2, PSII-Q, PSBQ component PsbQ of PS-II oxygen-evolving center 0.1 OrthoFinder output from all 47 species
LOC_Os02g36850.1 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.07 OrthoFinder output from all 47 species
LOC_Os04g44200.1 PQL3, LOC_Os04g44200 PsbQ-like protein 3, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os07g01480.1 PQL1, PQL2,... component PnsL3/PQL2 of NDH lumen subcomplex L 0.06 OrthoFinder output from all 47 species
LOC_Os07g36080.1 PSBQA, PSBQ-1,... component PsbQ of PS-II oxygen-evolving center 0.13 OrthoFinder output from all 47 species
Len_g22517 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Lfl_g00670 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
MA_218996g0010 PSBQA, PSBQ-1, PSBQ component PsbQ of PS-II oxygen-evolving center 0.06 OrthoFinder output from all 47 species
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.19 OrthoFinder output from all 47 species
Msp_g48334 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Nbi_g27611 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Ore_g01040 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ore_g21011 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Ore_g34253 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Pir_g00788 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Pnu_g12550 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Pp3c13_6570V3.1 PSBQA, PSBQ-1,... photosystem II subunit QA 0.03 OrthoFinder output from all 47 species
Ppi_g11659 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Ppi_g20155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012902 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Sam_g14072 No alias component *(PsbQ) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Smo106248 PSBQ-2, PSII-Q, PSBQ Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
Solyc02g079950.3.1 PSBQ-2, PSII-Q,... component PsbQ of PS-II oxygen-evolving center 0.23 OrthoFinder output from all 47 species
Solyc05g007780.3.1 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.06 OrthoFinder output from all 47 species
Solyc10g006530.4.1 PQL1, PQL2,... Photosynthetic NDH subunit of lumenal location 3,... 0.05 OrthoFinder output from all 47 species
Spa_g21161 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Spa_g25498 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Spa_g56049 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Tin_g19213 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Zm00001e007556_P001 PQL3, Zm00001e007556 PsbQ-like protein 3, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e010513_P001 PSBQ-2, PSII-Q,... component PsbQ of PS-II oxygen-evolving center 0.17 OrthoFinder output from all 47 species
Zm00001e014918_P002 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.09 OrthoFinder output from all 47 species
Zm00001e022814_P002 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.05 OrthoFinder output from all 47 species
Zm00001e032657_P001 PQL1, PQL2,... component PnsL3/PQL2 of NDH lumen subcomplex L 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005960 glycine cleavage complex IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008797 PSII_PsbQ 30 220
No external refs found!