AMTR_s00098p00100110 (ATATG18F, G18F,...)


Aliases : ATATG18F, G18F, ATG18F, evm_27.TU.AmTr_v1.0_scaffold00098.28

Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0001998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001998_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00098p00100110
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Ala_g02641 ATG18H, ATATG18H component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Mp3g05770.1 ATG18H, ATATG18H component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007238 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 304 331
IPR022175 BCAS3 450 687
No external refs found!