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  5. AMTR_s00096p00170210

AMTR_s00096p00170210 (UBP15,...)


Aliases : UBP15, evm_27.TU.AmTr_v1.0_scaffold00096.118

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00096p00170210

Target Alias Description ECC score Gene Family Method Actions
Adi_g069165 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10021 UBP25 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12934 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0193.g057119 UBP25 deubiquitinase *(UBP25) & original description: CDS=1845-3893 0.04 OrthoFinder output from all 47 species
Dac_g01006 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03145 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000696001 UBP15 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01001912001 UBP23 Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
GSVIVT01009158001 UBP16 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Gb_09344 UBP15 Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_17492 UBP15 Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28940.1 UBP17, LOC_Os09g28940 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Len_g01378 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03280 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433504g0010 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g16110.1 UBP23 deubiquitinase (UBP23) 0.03 OrthoFinder output from all 47 species
Nbi_g03824 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024878_P003 UBP15, Zm00001e024878 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000922 spindle pole IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 274 560
No external refs found!