AMTR_s00095p00175220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.153

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP68 component


Gene families : OG0004017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00095p00175220
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Mp1g14730.1 No alias component SRP68 of SRP (signal recognition particle) complex 0.02 OrthoFinder output from all 47 species
Ore_g05817 No alias component *(SRP68) of SRP (signal recognition particle)... 0.03 OrthoFinder output from all 47 species
Solyc02g062810.4.1 Solyc02g062810 component SRP68 of SRP (signal recognition particle) complex 0.04 OrthoFinder output from all 47 species
Solyc03g093970.3.1 Solyc03g093970 component SRP68 of SRP (signal recognition particle) complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000922 spindle pole IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
CC GO:0009341 beta-galactosidase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!