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  5. Aev_g07274

Aev_g07274 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g07274
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.04 OrthoFinder output from all 47 species
Aop_g13904 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g23453 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19890 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010999001 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
GSVIVT01017810001 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
LOC_Os02g47640.1 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g22800.1 AtTLP3, TLP3,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003029 AtTLP3, TLP3 TUB-type transcription factor & original description: CDS=1-1392 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024249 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g14642 No alias TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Smo83983 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
Zm00001e001672_P001 AtTLP3, TLP3,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e019166_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Zm00001e023326_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e031774_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 121 413
IPR001810 F-box_dom 60 105
No external refs found!