AMTR_s00095p00115990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.72

No description available


Gene families : OG0000890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000890_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00095p00115990
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Adi_g013768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04881 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G007300.1 Ceric.03G007300 not classified & original description: pacid=50571459... 0.06 OrthoFinder output from all 47 species
Dac_g08567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01025834001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_39255 No alias Rhodanese-like domain-containing protein 6... 0.05 OrthoFinder output from all 47 species
LOC_Os04g37710.1 LOC_Os04g37710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g29432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_2637g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Ppi_g30907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g060570.3.1 Solyc06g060570 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g010420.3.1 Solyc11g010420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g04919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007960_P001 Zm00001e007960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035911_P001 Zm00001e035911 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR005645 FSH_dom 2 192
No external refs found!