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  5. AMTR_s00095p00113890

AMTR_s00095p00113890 (CAM3, acam-3,...)


Aliases : CAM3, acam-3, evm_27.TU.AmTr_v1.0_scaffold00095.70

Description : Calmodulin OS=Medicago sativa


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00095p00113890

Target Alias Description ECC score Gene Family Method Actions
AT5G37780 TCH1, CAM1, ACAM-1 calmodulin 1 0.05 OrthoFinder output from all 47 species
Adi_g002632 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g021511 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g051294 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g26311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05659 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09412 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13347 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28698 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07660 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10087 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g42996 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0257.g060582 CAM3, acam-3 calcium sensor *(CML) & original description: CDS=211-660 0.03 OrthoFinder output from all 47 species
Cba_g16145 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G015900.1 CAM3, acam-3,... calcium sensor *(CML) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.20G013100.1 CAM3, acam-3,... calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G023400.1 ACAM-6, CAM6,... calcium sensor *(CML) & original description:... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021435.44 ACAM-6, CAM6 Calmodulin OS=Mougeotia scalaris 0.02 OrthoFinder output from all 47 species
Cre03.g178150 ACAM-6, CAM6 Calmodulin OS=Chlamydomonas reinhardtii 0.01 OrthoFinder output from all 47 species
Dcu_g07309 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13835 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01248 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037418001 ACAM-2, CAM5 Calmodulin-related protein OS=Petunia hybrida 0.03 OrthoFinder output from all 47 species
LOC_Os03g20370.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Lfl_g26410 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
MA_15211g0010 CAM3, acam-3 Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species
MA_52889g0010 CAM3, acam-3 Calmodulin-related protein OS=Petunia hybrida... 0.04 OrthoFinder output from all 47 species
Msp_g04344 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006454 ACAM-6, CAM6 calcium sensor *(CML) & original description: CDS=1-450 0.03 OrthoFinder output from all 47 species
Smo141966 CAM3, acam-3 Calmodulin-1 OS=Oryza sativa subsp. indica 0.04 OrthoFinder output from all 47 species
Solyc03g098050.3.1 CAM3, acam-3,... Calmodulin OS=Solanum lycopersicum (sp|p27161|calm_sollc : 234.0) 0.02 OrthoFinder output from all 47 species
Solyc10g081170.2.1 CAM3, acam-3,... Calmodulin-related protein OS=Petunia hybrida... 0.04 OrthoFinder output from all 47 species
Zm00001e035910_P001 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0051766 inositol trisphosphate kinase activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 86 146
IPR011992 EF-hand-dom_pair 14 73
No external refs found!