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Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.47
Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS12 component
Gene families : OG0001020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G15930 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.11 | OrthoFinder output from all 47 species | |
| AT2G32060 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.18 | OrthoFinder output from all 47 species | |
| Adi_g077882 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g102620 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g129311 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g00488 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12283 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g16289 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g32040 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g38702 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g09029 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04614 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36028 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g15941 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g19990 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30423 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g67327 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Aspi01Gene12124.t1 | Aspi01Gene12124 | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene17919.t1 | Aspi01Gene17919 | component *(eS12) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0161.g054093 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Cba_g07211 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g68172 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g71372 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.37G058700.1 | Ceric.37G058700 | component *(eS12) of small ribosomal-subunit (SSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.37G058800.1 | Ceric.37G058800 | component *(eS12) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.37G058900.1 | Ceric.37G058900 | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020903.34 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.18 | OrthoFinder output from all 47 species | |
| Cre04.g214503 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.19 | OrthoFinder output from all 47 species | |
| Dac_g03015 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g03474 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g25477 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g05975 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38565 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g00249 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03052 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01023591001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01034219001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_19269 | No alias | component RPS12 of SSU proteome | 0.13 | OrthoFinder output from all 47 species | |
| Gb_38833 | No alias | component RPS12 of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os07g05580.1 | LOC_Os07g05580 | component RPS12 of SSU proteome | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os07g12650.1 | LOC_Os07g12650 | component RPS12 of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
| Len_g05775 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g49897 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54633 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g20839 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| MA_16920g0010 | No alias | component RPS12 of SSU proteome | 0.14 | OrthoFinder output from all 47 species | |
| Mp7g11470.1 | No alias | component RPS12 of SSU proteome | 0.17 | OrthoFinder output from all 47 species | |
| Msp_g03347 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Nbi_g05093 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g32162 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g41112 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g14965 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_3630V3.1 | Pp3c17_3630 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.11 | OrthoFinder output from all 47 species | |
| Ppi_g06093 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15650 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g20762 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g25213 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31355 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g50714 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0061.g015439 | No alias | EC_2.7 transferase transferring phosphorus-containing... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g04208 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Sam_g06992 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g09099 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g18573 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Smo441919 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Solyc01g103800.3.1 | Solyc01g103800 | component RPS12 of SSU proteome | 0.15 | OrthoFinder output from all 47 species | |
| Solyc12g042650.2.1 | Solyc12g042650 | component RPS12 of SSU proteome | 0.17 | OrthoFinder output from all 47 species | |
| Spa_g05809 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g17185 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Spa_g22036 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g43206 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g00435 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09574 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g35882 | No alias | component *(eS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009380_P001 | Zm00001e009380 | component RPS12 of SSU proteome | 0.15 | OrthoFinder output from all 47 species | |
| Zm00001e027021_P002 | Zm00001e027021 | component RPS12 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e032507_P001 | Zm00001e032507 | component RPS12 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e033149_P001 | Zm00001e033149 | component RPS12 of SSU proteome | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 40 | 133 |
| No external refs found! |