1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00095p00043050

AMTR_s00095p00043050 (MAP70-1, ATMAP70-1,...)


Aliases : MAP70-1, ATMAP70-1, evm_27.TU.AmTr_v1.0_scaffold00095.19

Description : Microtubule-associated protein 70-2 OS=Arabidopsis thaliana


Gene families : OG0001082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001082_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00095p00043050

Target Alias Description ECC score Gene Family Method Actions
AT1G14840 MAP70-4, ATMAP70-4 microtubule-associated proteins 70-4 0.04 OrthoFinder output from all 47 species
Adi_g019658 MAP70-4, ATMAP70-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084649 ATMAP70-3, MAP70-3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g45539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g46547 MAP70-4, ATMAP70-4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52030 MAP70-4, ATMAP70-4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011656001 MAP70-2, ATMAP70-2 Microtubule-associated protein 70-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g11650.1 ATMAP70-3,... Microtubule-associated protein 70-4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os06g14080.1 MAP70-1,... Microtubule-associated protein 70-3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g44340.1 MAP70-1,... Microtubule-associated protein 70-1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Lfl_g12032 MAP70-4, ATMAP70-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07381 MAP70-4, ATMAP70-4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02397 MAP70-4, ATMAP70-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30611 MAP70-1, ATMAP70-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g017980.3.1 MAP70-1,... Microtubule-associated protein 70-1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g07608 MAP70-4, ATMAP70-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030924_P003 MAP70-1,... Microtubule-associated protein 70-3 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e036017_P001 MAP70-1,... Microtubule-associated protein 70-3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR009768 MAP70 203 552
No external refs found!