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  5. AMTR_s00094p00112650

AMTR_s00094p00112650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00094.11

Description : Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica


Gene families : OG0009105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00094p00112650
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT3G15240 No alias No description available 0.04 OrthoFinder output from all 47 species
AT5G53900 No alias Serine/threonine-protein kinase WNK (With No Lysine)-related 0.04 OrthoFinder output from all 47 species
Als_g40136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37888.t1 Aspi01Gene37888 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014299001 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
LOC_Os11g25920.1 LOC_Os11g25920 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_136863g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Ppi_g32569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019565_P001 Zm00001e019565 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 16 191
No external refs found!