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Aliases : WIP6, DOT5, evm_27.TU.AmTr_v1.0_scaffold00093.55
Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00093p00164790 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G13290 | WIP6, DOT5 | C2H2-like zinc finger protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G34790 | TT1, WIP1 | C2H2 and C2HC zinc fingers superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G57670 | WIP2, NTT | C2H2-type zinc finger family protein | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009046001 | TT1, WIP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032076001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01033329001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g40960.1 | WIP2, NTT, LOC_Os06g40960 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os08g39390.1 | WIP2, NTT, LOC_Os08g39390 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g31140.1 | WIP2, NTT, LOC_Os09g31140 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_3555g0010 | WIP6, DOT5 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g38869 | WIP3 | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g05192 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo36987 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g20999 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003504_P001 | WIP2, NTT, Zm00001e003504 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e009663_P001 | WIP6, DOT5,... | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e024373_P001 | WIP2, NTT, Zm00001e024373 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e033781_P001 | WIP6, DOT5,... | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |