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  5. AMTR_s00093p00110710

AMTR_s00093p00110710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00093.40

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00093p00110710

Target Alias Description ECC score Gene Family Method Actions
AT2G03500 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G25790 No alias myb-like transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT4G37180 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene06858.t1 Aspi01Gene06858 GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G044500.1 Ceric.19G044500 GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_14087g0010 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Pir_g14104 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo402040 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Zm00001e011977_P003 Zm00001e011977 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e016724_P001 Zm00001e016724 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 169 220
No external refs found!