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  5. AMTR_s00092p00172590

AMTR_s00092p00172590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.158

Description : Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00172590

Target Alias Description ECC score Gene Family Method Actions
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.05 OrthoFinder output from all 47 species
Adi_g074127 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Als_g22993 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Als_g23969 ATNCED5, NCED5 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene08012.t1 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29851.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54184.t1 ATCCD1, CCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76799 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ceric.06G077400.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dcu_g48845 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.06 OrthoFinder output from all 47 species
Dde_g23722 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.06 OrthoFinder output from all 47 species
Dde_g23816 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Dde_g28937 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g12236 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ehy_g20931 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
GSVIVT01029057001 NCED6, ATNCED6 Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g44380.1 NCED3, SIS7,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Len_g47883 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
MA_10425950g0010 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.05 OrthoFinder output from all 47 species
MA_41906g0010 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1... 0.08 OrthoFinder output from all 47 species
MA_450285g0010 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.05 OrthoFinder output from all 47 species
MA_90573g0010 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.04 OrthoFinder output from all 47 species
Nbi_g29519 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Pir_g00537 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Pir_g57367 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Pnu_g06396 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Ppi_g29309 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g40059 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011645 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Smo233638 NCED3, SIS7,... Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.06 OrthoFinder output from all 47 species
Smo441302 NCED3, SIS7,... No description available 0.04 OrthoFinder output from all 47 species
Smo80651 NCED3, SIS7,... Secondary metabolism.terpenoids.terpenoid... 0.06 OrthoFinder output from all 47 species
Spa_g10177 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Tin_g15213 NCED3, SIS7,... EC_1.13 oxidoreductase acTing on single donor with... 0.07 OrthoFinder output from all 47 species
Zm00001e017976_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
Zm00001e023318_P001 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.03 OrthoFinder output from all 47 species
Zm00001e032833_P001 ATNCED9, NCED9,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 136 602
No external refs found!