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  5. AMTR_s00092p00167540

AMTR_s00092p00167540 (CH42, CHLI1, CH-42,...)


Aliases : CH42, CHLI1, CH-42, CHL11, CHLI-1, evm_27.TU.AmTr_v1.0_scaffold00092.149

Description : Enzyme classification.EC_6 ligases.EC_6.6 ligase forming nitrogen-metal bond


Gene families : OG0004301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00167540
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT4G18480 CH42, CHLI1,... P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Adi_g012498 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Aev_g48552 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.07 OrthoFinder output from all 47 species
Ala_g27481 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Als_g13680 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g42788 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.06 OrthoFinder output from all 47 species
Aop_g10481 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
Ceric.35G036500.1 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Cre06.g306300 CH42, CHLI1,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder output from all 47 species
Cre12.g510800 CH42, CHLI1,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.06 OrthoFinder output from all 47 species
Dcu_g15308 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.08 OrthoFinder output from all 47 species
Dde_g16751 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.06 OrthoFinder output from all 47 species
Ehy_g04604 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.08 OrthoFinder output from all 47 species
GSVIVT01021169001 CH42, CHLI1,... Enzyme classification.EC_6 ligases.EC_6.6 ligase forming... 0.03 OrthoFinder output from all 47 species
Gb_27010 CH42, CHLI1,... component CHL-I of magnesium-chelatase complex 0.05 OrthoFinder output from all 47 species
LOC_Os03g36540.1 CHL I2, CHLI2,... component CHL-I of magnesium-chelatase complex 0.04 OrthoFinder output from all 47 species
Len_g10550 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.06 OrthoFinder output from all 47 species
Lfl_g06951 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
MA_48250g0010 CH42, CHLI1,... component CHL-I of magnesium-chelatase complex 0.09 OrthoFinder output from all 47 species
Mp2g21150.1 CHL I2, CHLI2, CHLI-2 component CHL-I of magnesium-chelatase complex 0.07 OrthoFinder output from all 47 species
Msp_g07868 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Nbi_g04810 CH42, CHLI1,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g35827 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Pir_g66743 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Pp3c10_2940V3.1 CH42, CHLI1,... P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Ppi_g10566 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024301 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.09 OrthoFinder output from all 47 species
Smo230423 CHL I2, CHLI2, CHLI-2 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.06 OrthoFinder output from all 47 species
Solyc10g008740.3.1 CH42, CHLI1,... component CHL-I of magnesium-chelatase complex 0.08 OrthoFinder output from all 47 species
Spa_g05543 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g17924 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Spa_g17925 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g52168 CHL I2, CHLI2, CHLI-2 EC_6.6 ligase forming nitrogen-metal bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e039463_P003 CHL I2, CHLI2,... component CHL-I of magnesium-chelatase complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004047 aminomethyltransferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!