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  5. AMTR_s00092p00074340

AMTR_s00092p00074340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.37

No description available


Gene families : OG0001845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00074340
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00109000 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ala_g25560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44820.t1 Aspi01Gene44820 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44821.t1 Aspi01Gene44821 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011447 No alias not classified & original description: CDS=497-1966 0.03 OrthoFinder output from all 47 species
Cba_g05715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04838 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g41400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010242001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_00647 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g02500.1 LOC_Os02g02500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_121354g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g28990.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g17160.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g06131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003133 No alias not classified & original description: CDS=1-1326 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024675 No alias not classified & original description: CDS=2620-4236 0.03 OrthoFinder output from all 47 species
Smo417767 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g40873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025360_P003 Zm00001e025360 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 417 523
No external refs found!