AMTR_s00092p00050170 (AAT1, CAT1,...)


Aliases : AAT1, CAT1, evm_27.TU.AmTr_v1.0_scaffold00092.21

Description : Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00050170

Target Alias Description ECC score Gene Family Method Actions
AT5G04770 ATCAT6, CAT6 cationic amino acid transporter 6 0.05 OrthoFinder output from all 47 species
Adi_g020823 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G098300.1 ATCAT6, CAT6,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08835 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g12855 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dde_g10920 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01012155001 CAT5 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
LOC_Os01g11160.1 CAT5, LOC_Os01g11160 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
LOC_Os03g43970.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
MA_78005g0010 CAT7 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Nbi_g22508 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Smo173423 CAT7 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Zm00001e005030_P001 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!