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  5. AMTR_s00092p00035570

AMTR_s00092p00035570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.14

Description : Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00035570

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00136030 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G61130 PDCB1 plasmodesmata callose-binding protein 1 0.03 OrthoFinder output from all 47 species
Aop_g09349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08830.t1 Aspi01Gene08830 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046176 No alias not classified & original description: CDS=153-617 0.02 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G008700.1 Ceric.05G008700 not classified & original description: pacid=50577231... 0.03 OrthoFinder output from all 47 species
Ceric.36G000700.1 Ceric.36G000700 not classified & original description: pacid=50569024... 0.03 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23930 PDCB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.03 OrthoFinder output from all 47 species
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g04122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g058080.3.1 Solyc04g058080 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g047710.3.1 Solyc07g047710 Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g091920.3.1 Solyc09g091920 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g14416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005720_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e032121_P001 PDCB1, Zm00001e032121 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e037118_P002 PDCB5, Zm00001e037118 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 48 118
No external refs found!