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  5. AMTR_s00091p00025820

AMTR_s00091p00025820 (MYB43, AtMYB43,...)


Aliases : MYB43, AtMYB43, evm_27.TU.AmTr_v1.0_scaffold00091.4

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00091p00025820

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00189590 MYB84, RAX3,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.03 OrthoFinder output from all 47 species
Adi_g008981 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.04 OrthoFinder output from all 47 species
Aev_g02354 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04664 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22400 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ala_g26998 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ala_g27617 ATMYB61, MYB61 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36129 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35523.t1 MYB86, ATMYB86,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47582.t1 MYB7, ATY49,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009119 AtMYB50, MYB50 not classified & original description: CDS=159-1784 0.02 OrthoFinder output from all 47 species
Cba_g75895 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ceric.35G046400.1 ATMYB61, MYB61,... MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dcu_g00835 MYB6, AtMYB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016768001 ATMYB4, MYB4 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01027811001 ATMYB15, ATY19, MYB15 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01028171001 BOS1, AtMYB108, MYB108 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01034943001 BOS1, AtMYB108, MYB108 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_02020 ATMYB4, MYB4 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Gb_22885 ATMYB12, PFG1, MYB12 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g74410.1 ATMYB59-1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g46780.1 MYB58, ATMYB58,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g04210.1 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g04820.1 ATMYB61, MYB61,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g48010.1 MYB84, RAX3,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os10g33810.1 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_10433651g0010 MYB3, ATMYB3 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_1850812g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_62488g0010 AtMYB107, MYB107 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
MA_9818613g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp4g21790.1 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Ore_g29597 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g07835 MYB60, AtMYB60 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14448 AtMYB50, MYB50 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g31100 MYB6, AtMYB6 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49383 ATMYB48-1,... MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02474 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc05g055030.2.1 ATMYB15, ATY19,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Solyc07g052300.3.1 ATMYB101,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc12g005640.2.1 ATMYB14, MYB14,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Spa_g16888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18882 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31073 MYB86, ATMYB86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005823_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e008489_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e010995_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e011944_P001 MYB84, RAX3,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e015235_P001 MYB19, AtMYB19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e016072_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e036223_P001 ATMYB5, MYB5,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e040265_P001 MYB103,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e040334_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 70 111
IPR001005 SANT/Myb 14 61
No external refs found!