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  5. AMTR_s00089p00111500

AMTR_s00089p00111500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00089.62

Description : Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.FAN1 endonuclease


Gene families : OG0005038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00089p00111500

Target Alias Description ECC score Gene Family Method Actions
Cba_g71827 No alias endonuclease *(FAN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G005200.1 Ceric.12G005200 endonuclease *(FAN1) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g15344 No alias endonuclease *(FAN1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031656001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.06 OrthoFinder output from all 47 species
Msp_g15381 No alias endonuclease *(FAN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16074 No alias endonuclease *(FAN1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003937 IMP cyclohydrolase activity IEP HCCA
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009432 SOS response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014905 HIRAN 247 327
IPR014883 VRR_NUC 860 968
No external refs found!