1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00088p00164330

AMTR_s00088p00164330 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.134

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00164330

Target Alias Description ECC score Gene Family Method Actions
Aev_g05450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G048600.1 Ceric.39G048600 not classified & original description: pacid=50582455... 0.03 OrthoFinder output from all 47 species
GSVIVT01008925001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_32332 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g59380.1 LOC_Os04g59380 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g04292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014168 No alias not classified & original description: CDS=1-1884 0.03 OrthoFinder output from all 47 species
Tin_g17139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001154_P001 Zm00001e001154 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e019606_P002 Zm00001e019606 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0031227 obsolete intrinsic component of endoplasmic reticulum membrane IEP HCCA

No InterPro domains available for this sequence

No external refs found!