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  5. AMTR_s00088p00141710

AMTR_s00088p00141710 (ARL1,...)


Aliases : ARL1, evm_27.TU.AmTr_v1.0_scaffold00088.109

Description : External stimuli response.gravity.sensing and signalling.ARG1 signalling protein factor


Gene families : OG0001362 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001362_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00141710
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g043408 ARG1 gravity signalling protein factor *(ARG1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g027078 ARG1 gravity signalling protein factor *(ARG1) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g01169 ARG1 gravity signalling protein factor *(ARG1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e018227_P001 ARG1, Zm00001e018227 ARG1 gravity signalling protein factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006184 obsolete GTP catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 20 82
No external refs found!