AMTR_s00088p00117460 (ATRAC8, ATROP10,...)

Aliases : ATRAC8, ATROP10, ROP10, ARAC8, evm_27.TU.AmTr_v1.0_scaffold00088.83

Description : Multi-process regulation.Rop GTPase regulatory system.Rop small GTPase

Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00088p00117460

Target	Alias	Description	ECC score	Gene Family Method
Aev_g13243	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22369	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g06422	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene37305.t1	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g08696	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009947001	ATRAC1, ROP3,...	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
LOC_Os02g58730.1	ATRAC1, ROP3,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species
Len_g29379	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g01837	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g18333	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g39021	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004298	threonine-type endopeptidase activity	IEP	HCCA
MF	GO:0004807	triose-phosphate isomerase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0016272	prefoldin complex	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0070003	threonine-type peptidase activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	10	180

External Links

No external refs found!

AMTR_s00088p00117460 (ATRAC8, ATROP10,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation