AMTR_s00088p00054060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.31

No description available


Gene families : OG0008988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008988_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00054060
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00061760 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00088p00063810 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G13500 No alias Protein of unknown function (DUF1262) 0.06 OrthoFinder output from all 47 species
AT1G13510 No alias Protein of unknown function (DUF1262) 0.07 OrthoFinder output from all 47 species
AT1G13520 No alias Protein of unknown function (DUF1262) 0.08 OrthoFinder output from all 47 species
AT1G13540 No alias Protein of unknown function (DUF1262) 0.03 OrthoFinder output from all 47 species
AT1G61600 No alias Protein of unknown function (DUF1262) 0.05 OrthoFinder output from all 47 species
GSVIVT01012025001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01012026001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_01792 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_22146 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g31860.1 LOC_Os08g31860 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g31890.1 LOC_Os08g31890 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10435025g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8352311g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc02g089650.3.1 Solyc02g089650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e022372_P001 Zm00001e022372 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR010683 DUF1262 29 136
No external refs found!