AMTR_s00088p00045930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.23

Description : Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00045930
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G56570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G69350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G01580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G09040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G26540 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G21300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G38010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G37570 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G40410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g003262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036768 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046905 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069271 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36953 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04425 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38374.t1 Aspi01Gene38374 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013569 No alias not classified & original description: CDS=1-2385 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.02 OrthoFinder output from all 47 species
Azfi_s0194.g057200 No alias not classified & original description: CDS=1-3033 0.02 OrthoFinder output from all 47 species
Azfi_s0197.g057356 No alias not classified & original description: CDS=1-2922 0.02 OrthoFinder output from all 47 species
Azfi_s0210.g058082 No alias not classified & original description: CDS=1-2637 0.03 OrthoFinder output from all 47 species
Azfi_s0221.g058730 No alias not classified & original description: CDS=1-747 0.02 OrthoFinder output from all 47 species
Azfi_s0229.g059115 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2115 0.03 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.02 OrthoFinder output from all 47 species
Azfi_s0349.g066523 EMB2758 not classified & original description: CDS=141-2294 0.02 OrthoFinder output from all 47 species
Cba_g07198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G115200.1 Ceric.01G115200 not classified & original description: pacid=50591005... 0.04 OrthoFinder output from all 47 species
Ceric.02G042200.1 Ceric.02G042200 not classified & original description: pacid=50585785... 0.03 OrthoFinder output from all 47 species
Ceric.02G044500.1 Ceric.02G044500 not classified & original description: pacid=50585717... 0.03 OrthoFinder output from all 47 species
Ceric.02G080300.1 Ceric.02G080300 not classified & original description: pacid=50586181... 0.03 OrthoFinder output from all 47 species
Ceric.04G047600.1 Ceric.04G047600 not classified & original description: pacid=50632074... 0.04 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.03 OrthoFinder output from all 47 species
Ceric.04G100100.1 Ceric.04G100100 not classified & original description: pacid=50630537... 0.03 OrthoFinder output from all 47 species
Ceric.05G058700.1 Ceric.05G058700 not classified & original description: pacid=50578964... 0.03 OrthoFinder output from all 47 species
Ceric.06G069000.1 Ceric.06G069000 not classified & original description: pacid=50620210... 0.03 OrthoFinder output from all 47 species
Ceric.07G030200.1 Ceric.07G030200 not classified & original description: pacid=50627452... 0.03 OrthoFinder output from all 47 species
Ceric.10G030000.1 Ceric.10G030000 not classified & original description: pacid=50612250... 0.03 OrthoFinder output from all 47 species
Ceric.11G040400.1 Ceric.11G040400 not classified & original description: pacid=50596720... 0.03 OrthoFinder output from all 47 species
Ceric.11G086200.1 OTP84, Ceric.11G086200 not classified & original description: pacid=50595902... 0.03 OrthoFinder output from all 47 species
Ceric.12G028500.1 CRR22, Ceric.12G028500 not classified & original description: pacid=50602410... 0.04 OrthoFinder output from all 47 species
Ceric.13G010900.1 Ceric.13G010900 not classified & original description: pacid=50636623... 0.05 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.04 OrthoFinder output from all 47 species
Ceric.14G093100.1 EMB2758, Ceric.14G093100 not classified & original description: pacid=50634261... 0.03 OrthoFinder output from all 47 species
Ceric.16G016300.1 Ceric.16G016300 not classified & original description: pacid=50589149... 0.04 OrthoFinder output from all 47 species
Ceric.18G014200.1 VAC1, ECB2,... not classified & original description: pacid=50622305... 0.03 OrthoFinder output from all 47 species
Ceric.1Z003200.1 Ceric.1Z003200 not classified & original description: pacid=50628145... 0.04 OrthoFinder output from all 47 species
Ceric.20G051600.1 Ceric.20G051600 not classified & original description: pacid=50567347... 0.04 OrthoFinder output from all 47 species
Ceric.21G042400.1 Ceric.21G042400 not classified & original description: pacid=50602832... 0.03 OrthoFinder output from all 47 species
Ceric.21G084300.1 OTP86, Ceric.21G084300 not classified & original description: pacid=50604215... 0.03 OrthoFinder output from all 47 species
Ceric.22G068500.1 Ceric.22G068500 not classified & original description: pacid=50614116... 0.04 OrthoFinder output from all 47 species
Ceric.23G021700.1 Ceric.23G021700 not classified & original description: pacid=50610576... 0.03 OrthoFinder output from all 47 species
Ceric.26G016100.1 OTP84, Ceric.26G016100 not classified & original description: pacid=50599360... 0.03 OrthoFinder output from all 47 species
Ceric.28G044700.1 Ceric.28G044700 not classified & original description: pacid=50570014... 0.05 OrthoFinder output from all 47 species
Ceric.28G059900.1 Ceric.28G059900 not classified & original description: pacid=50569765... 0.03 OrthoFinder output from all 47 species
Ceric.30G025700.1 CRR22, Ceric.30G025700 not classified & original description: pacid=50609433... 0.03 OrthoFinder output from all 47 species
Ceric.30G033800.1 Ceric.30G033800 not classified & original description: pacid=50608836... 0.03 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.03 OrthoFinder output from all 47 species
Ceric.30G057500.1 Ceric.30G057500 not classified & original description: pacid=50608517... 0.04 OrthoFinder output from all 47 species
Ceric.34G009600.1 Ceric.34G009600 not classified & original description: pacid=50623440... 0.03 OrthoFinder output from all 47 species
Ceric.34G039200.1 Ceric.34G039200 not classified & original description: pacid=50623691... 0.03 OrthoFinder output from all 47 species
Ceric.34G069900.1 Ceric.34G069900 not classified & original description: pacid=50624195... 0.03 OrthoFinder output from all 47 species
Ceric.35G007000.1 Ceric.35G007000 not classified & original description: pacid=50581130... 0.03 OrthoFinder output from all 47 species
Ceric.35G063700.1 Ceric.35G063700 not classified & original description: pacid=50581590... 0.03 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.02 OrthoFinder output from all 47 species
Ceric.37G010300.1 Ceric.37G010300 not classified & original description: pacid=50616652... 0.04 OrthoFinder output from all 47 species
Ceric.38G015500.1 Ceric.38G015500 not classified & original description: pacid=50579581... 0.02 OrthoFinder output from all 47 species
Ceric.38G063600.1 Ceric.38G063600 not classified & original description: pacid=50580365... 0.03 OrthoFinder output from all 47 species
Dac_g18577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44415 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03759 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08229 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16950 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45852 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47804 MEF21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22354 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23999 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g41263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06035 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000968001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01008715001 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
GSVIVT01015233001 EMB2261 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01019231001 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
GSVIVT01021023001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01026141001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
GSVIVT01028819001 No alias Pentatricopeptide repeat-containing protein At5g52850,... 0.04 OrthoFinder output from all 47 species
GSVIVT01036788001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_08518 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_16062 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_39702 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os01g68490.1 MEF21, LOC_Os01g68490 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os06g49185.1 LOC_Os06g49185 Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 47 species
LOC_Os11g37330.2 LOI1, MEF11,... RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
LOC_Os12g01850.1 LOC_Os12g01850 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Len_g17579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07760 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10257685g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_10428509g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_107356g0010 CRR2 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_114722g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_116442g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_119635g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_122606g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_14659g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_16339g0010 CRR2 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_3449g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_483636g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_59148g0010 CRR22 RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
MA_60579g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
MA_7379g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_7691g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_8491g0010 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g33676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15684 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03998 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57327 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05183 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53363 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g002023 No alias not classified & original description: CDS=1-2592 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023182 No alias not classified & original description: CDS=1-4812 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0196.g025491 No alias not classified & original description: CDS=1-2298 0.03 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006920.4.1 Solyc01g006920 Pentatricopeptide repeat-containing protein At4g39530... 0.05 OrthoFinder output from all 47 species
Solyc02g011680.4.1 Solyc02g011680 Pentatricopeptide repeat-containing protein At5g27110... 0.05 OrthoFinder output from all 47 species
Solyc05g012630.2.1 Solyc05g012630 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc05g046280.3.1 Solyc05g046280 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.03 OrthoFinder output from all 47 species
Solyc06g069700.4.1 Solyc06g069700 Pentatricopeptide repeat-containing protein At5g61400... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc07g053520.2.1 SLO1, Solyc07g053520 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc07g055310.1.1 Solyc07g055310 Pentatricopeptide repeat-containing protein At2g41080... 0.02 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.05 OrthoFinder output from all 47 species
Solyc09g009950.4.1 Solyc09g009950 RNA editing factor (MEF10) 0.03 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Solyc09g065710.1.1 OTP86, Solyc09g065710 RNA editing factor (OTP86) 0.05 OrthoFinder output from all 47 species
Solyc11g006940.3.1 Solyc11g006940 component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Solyc11g067210.1.1 Solyc11g067210 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Spa_g56307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13689 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003284_P001 Zm00001e003284 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Zm00001e007597_P001 Zm00001e007597 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Zm00001e008183_P001 Zm00001e008183 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e011519_P001 Zm00001e011519 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e012607_P002 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e013211_P001 OTP82, Zm00001e013211 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
Zm00001e014800_P001 OTP82, Zm00001e014800 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Zm00001e019971_P001 Zm00001e019971 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e020567_P001 Zm00001e020567 RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
Zm00001e020583_P001 Zm00001e020583 Pentatricopeptide repeat-containing protein At2g33680... 0.04 OrthoFinder output from all 47 species
Zm00001e022858_P001 Zm00001e022858 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
Zm00001e029450_P001 Zm00001e029450 Pentatricopeptide repeat-containing protein At2g46050,... 0.04 OrthoFinder output from all 47 species
Zm00001e030887_P001 Zm00001e030887 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.04 OrthoFinder output from all 47 species
Zm00001e033171_P001 Zm00001e033171 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Zm00001e035419_P001 Zm00001e035419 Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
Zm00001e036301_P001 Zm00001e036301 Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 92 140
IPR002885 Pentatricopeptide_repeat 194 237
IPR002885 Pentatricopeptide_repeat 65 86
IPR002885 Pentatricopeptide_repeat 299 327
IPR002885 Pentatricopeptide_repeat 169 189
No external refs found!