1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00087p00169870

AMTR_s00087p00169870 (XRI1, XRI,...)


Aliases : XRI1, XRI, evm_27.TU.AmTr_v1.0_scaffold00087.53

Description : Protein XRI1 OS=Arabidopsis thaliana


Gene families : OG0001646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001646_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00087p00169870

Target Alias Description ECC score Gene Family Method Actions
Ala_g23912 XRI1, XRI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g30790.1 XRI1, XRI, LOC_Os04g30790 Protein XRI1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g10830.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g12419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!