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  5. AMTR_s00086p00180250

AMTR_s00086p00180250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00086.118

No description available


Gene families : OG0000860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000860_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00086p00180250

Target Alias Description ECC score Gene Family Method Actions
Aev_g03777 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Ala_g39288 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aob_g13051 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Cba_g01735 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.01 OrthoFinder output from all 47 species
GSVIVT01003726001 No alias No description available 0.03 OrthoFinder output from all 47 species
Mp2g14620.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007897 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR010471 DUF1068 7 172
No external refs found!