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Aliases : evm_27.TU.AmTr_v1.0_scaffold00086.103
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component
Gene families : OG0001142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00086p00164400 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G01250 | No alias | Ribosomal protein L30/L7 family protein | 0.14 | OrthoFinder output from all 47 species | |
| Adi_g099683 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g30462 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g61623 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0129.g048841 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0870.g090589 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g08001 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G041100.1 | Ceric.11G041100 | component *(uL30) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.34G033800.1 | Ceric.34G033800 | component *(uL30) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020909.42 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Cre12.g537800 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g10886 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g00598 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g33812 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04672 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21688 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01029288001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
| GSVIVT01029655001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01034230001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20650 | No alias | component RPL7 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os04g51630.1 | LOC_Os04g51630 | component RPL7 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os08g13690.1 | LOC_Os08g13690 | component RPL7 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os08g42920.1 | LOC_Os08g42920 | component RPL7 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g31973 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10428203g0010 | No alias | component RPL7 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| MA_109845g0010 | No alias | component RPL7 of LSU proteome component | 0.11 | OrthoFinder output from all 47 species | |
| MA_47548g0010 | No alias | component RPL7 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Mp3g13040.1 | No alias | component RPL7 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g04692 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g33450 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g21023 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g11275 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33373 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g11555 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c11_13640V3.1 | Pp3c11_13640 | Ribosomal protein L30/L7 family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_39470V3.1 | Pp3c1_39470 | Ribosomal protein L30/L7 family protein | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c2_1610V3.1 | Pp3c2_1610 | Ribosomal protein L30/L7 family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c2_5820V3.1 | Pp3c2_5820 | Ribosomal protein L30/L7 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12581 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g23835 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g26101 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015032 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g06365 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g10126 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g10127 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g13945 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g17394 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g47015 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g068400.3.1 | Solyc06g068400 | component RPL7 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g075090.4.1 | Solyc08g075090 | transcription factor (bHLH). component RPL7 of LSU... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g07368 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g43297 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21600 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e003731_P002 | Zm00001e003731 | component RPL7 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007015_P002 | Zm00001e007015 | component RPL7 of LSU proteome component | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e022294_P001 | Zm00001e022294 | component RPL7 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e040072_P002 | Zm00001e040072 | component RPL7 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e041593_P001 | Zm00001e041593 | component RPL7 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| No external refs found! |