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  5. AMTR_s00085p00055420

AMTR_s00085p00055420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00085.25

Description : Cell cycle.mitosis and meiosis.chromosome segregation.kinetochore proteins.NDC80 outer kinetochore complex.SPC25 component


Gene families : OG0005248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005248_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00085p00055420

Target Alias Description ECC score Gene Family Method Actions
AT3G48210 No alias CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020684.34 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 OrthoFinder output from all 47 species
LOC_Os01g74170.1 LOC_Os01g74170 component SPC25 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species
Zm00001e028256_P002 Zm00001e028256 component SPC25 of NDC80 outer kinetochore complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR013255 Spc25_C 152 223
No external refs found!