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  5. AMTR_s00085p00052820

AMTR_s00085p00052820 (CDC48A, CDC48,...)


Aliases : CDC48A, CDC48, ATCDC48, evm_27.TU.AmTr_v1.0_scaffold00085.22

Description : Cell division cycle protein 48 homolog OS=Glycine max


Gene families : OG0000128 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00085p00052820
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Ala_g20264 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 39 species
MA_10429450g0010 No alias Cell division control protein 48 homolog D... 0.02 OrthoFinder output from all 39 species
Pp3c4_26860V3.1 CDC48A, CDC48,... ATPase, AAA-type, CDC48 protein 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
CC GO:0000145 exocyst IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 249 378
IPR003959 ATPase_AAA_core 522 655
IPR003338 CDC4_N-term_subdom 34 116
IPR004201 Cdc48_dom2 136 199
No external refs found!