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  5. AMTR_s00084p00036460

AMTR_s00084p00036460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00084.6

No description available


Gene families : OG0002966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002966_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00084p00036460

Target Alias Description ECC score Gene Family Method Actions
AT5G24740 No alias Protein of unknown function (DUF1162) 0.1 OrthoFinder output from all 47 species
Adi_g011972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05069 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g26899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26569.t1 Aspi01Gene26569 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0359.g066851 No alias not classified & original description: CDS=121-8928 0.06 OrthoFinder output from all 47 species
Ceric.03G037800.1 Ceric.03G037800 not classified & original description: pacid=50571745... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.91 No alias No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.92 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.51 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.153 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g727600 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g05849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019366001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01019369001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01019371001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_28330 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g02350.1 LOC_Os08g02350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g02354.1 LOC_Os08g02354 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10435329g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_12699g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_174037g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g13250.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g36614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023047 No alias not classified & original description: CDS=181-6594 0.04 OrthoFinder output from all 47 species
Sam_g17461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo439148 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc11g045140.1.1 Solyc11g045140 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Tin_g09937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029198_P001 Zm00001e029198 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e029204_P001 Zm00001e029204 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
InterPro domains Description Start Stop
IPR009543 VPS13_VAB 2528 2801
IPR026854 VPS13-like_N 2 120
No external refs found!