1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00082p00059940

AMTR_s00082p00059940 (RST1,...)


Aliases : RST1, evm_27.TU.AmTr_v1.0_scaffold00082.4

Description : Protein RST1 OS=Arabidopsis thaliana


Gene families : OG0004554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004554_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00082p00059940

Target Alias Description ECC score Gene Family Method Actions
AT3G27670 RST1 ARM repeat superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g055838 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.02 OrthoFinder output from all 47 species
Aop_g14315 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010500 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.02 OrthoFinder output from all 47 species
Ceric.12G038700.1 RST1, Ceric.12G038700 regulatory cofactor *(RST1) of exosome complex &... 0.07 OrthoFinder output from all 47 species
Cre01.g010650 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g22672 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032418001 RST1 Protein RST1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_07737 RST1 regulatory cofactor (RST1) of exosome complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g07490.1 RST1, LOC_Os01g07490 regulatory cofactor (RST1) of exosome complex 0.02 OrthoFinder output from all 47 species
Lfl_g09718 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.04 OrthoFinder output from all 47 species
MA_182339g0020 RNR1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_43690g0010 RST1 Protein RST1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_74065g0010 No alias Protein RST1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp1g20850.1 RST1 regulatory cofactor (RST1) of exosome complex 0.02 OrthoFinder output from all 47 species
Ore_g37140 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g30835 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012444 No alias regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Sam_g11649 No alias regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Spa_g09091 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e016783_P003 RST1, Zm00001e016783 regulatory cofactor (RST1) of exosome complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022542 FOCAD/RST1_DUF3730 82 363
IPR022542 FOCAD/RST1_DUF3730 530 757
No external refs found!