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  5. AMTR_s00080p00099010

AMTR_s00080p00099010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00080.36

No description available


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00080p00099010

Target Alias Description ECC score Gene Family Method Actions
Adi_g060541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10648 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G017200.1 Ceric.03G017200 not classified & original description: pacid=50571554... 0.05 OrthoFinder output from all 47 species
Ceric.04G099500.1 Ceric.04G099500 not classified & original description: pacid=50631612... 0.04 OrthoFinder output from all 47 species
Ceric.24G040200.1 Ceric.24G040200 not classified & original description: pacid=50630010... 0.03 OrthoFinder output from all 47 species
Cre06.g270700 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g05139 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.02 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 150 220
No external refs found!