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  5. AMTR_s00079p00186170

AMTR_s00079p00186170 (AP19,...)


Aliases : AP19, evm_27.TU.AmTr_v1.0_scaffold00079.108

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit


Gene families : OG0004438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004438_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00079p00186170

Target Alias Description ECC score Gene Family Method Actions
AT4G35410 No alias Clathrin adaptor complex small chain family protein 0.03 OrthoFinder output from all 47 species
Adi_g025276 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Aob_g34008 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.05 OrthoFinder output from all 47 species
Cre09.g394100 AP19 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
Dac_g17595 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Dcu_g24121 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Dde_g28499 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Ehy_g01910 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Gb_30890 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
LOC_Os03g57040.1 AP19, LOC_Os03g57040 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Lfl_g17082 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
MA_130401g0010 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Mp1g27490.1 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Ore_g29733 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Pp3c4_27730V3.1 AP19, Pp3c4_27730 associated protein 19 0.01 OrthoFinder output from all 47 species
Ppi_g15365 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.04 OrthoFinder output from all 47 species
Solyc11g005220.2.1 Solyc11g005220 small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Zm00001e005895_P003 AP19, Zm00001e005895 small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005496 steroid binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 7 145
No external refs found!