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  5. AMTR_s00079p00166070

AMTR_s00079p00166070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.78

No description available


Gene families : OG0001929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00166070
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT1G67040 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
AT3G58650 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.11 OrthoFinder output from all 47 species
Aspi01Gene57945.t1 Aspi01Gene57945 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68966.t1 Aspi01Gene68966 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010580 No alias not classified & original description: CDS=28-3156 0.03 OrthoFinder output from all 47 species
Azfi_s0592.g078764 No alias not classified & original description: CDS=360-3512 0.02 OrthoFinder output from all 47 species
Ceric.06G066100.1 Ceric.06G066100 not classified & original description: pacid=50619532... 0.06 OrthoFinder output from all 47 species
Ceric.17G018400.1 Ceric.17G018400 not classified & original description: pacid=50618175... 0.04 OrthoFinder output from all 47 species
Ceric.24G058500.1 Ceric.24G058500 not classified & original description: pacid=50628935... 0.06 OrthoFinder output from all 47 species
GSVIVT01031010001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01035042001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_15628 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g19080.3 LOC_Os03g19080 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g61620.1 LOC_Os03g61620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g40624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g14750.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g33172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g007008 No alias not classified & original description: CDS=144-3170 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018085 No alias not classified & original description: CDS=53-2638 0.03 OrthoFinder output from all 47 species
Smo443543 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc01g060410.4.1 Solyc01g060410 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g41418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08470 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g13690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001394_P001 Zm00001e001394 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Zm00001e006276_P001 Zm00001e006276 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e038358_P001 Zm00001e038358 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 878 1028
No external refs found!