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  5. AMTR_s00079p00162380

AMTR_s00079p00162380 (ATPHB3, PHB3,...)


Aliases : ATPHB3, PHB3, evm_27.TU.AmTr_v1.0_scaffold00079.74

Description : Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH3/10 matrix-AAA protease heterodimers.prohibitin component


Gene families : OG0002891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00162380

Target Alias Description ECC score Gene Family Method Actions
AT3G27280 PHB4, ATPHB4 prohibitin 4 0.05 OrthoFinder output from all 47 species
AT5G40770 ATPHB3, PHB3 prohibitin 3 0.12 OrthoFinder output from all 47 species
Adi_g102157 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.03 OrthoFinder output from all 47 species
Aev_g04549 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.02 OrthoFinder output from all 47 species
Ala_g12346 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.05 OrthoFinder output from all 47 species
Als_g59726 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.06 OrthoFinder output from all 47 species
Aop_g06918 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03283.t1 ATPHB3, PHB3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.34G044400.1 ATPHB3, PHB3,... component of FtsH3/10 matrix-AAA protease heterodimer &... 0.05 OrthoFinder output from all 47 species
Cre12.g519350 ATPHB3, PHB3 Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
Dcu_g16353 PHB4, ATPHB4 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.02 OrthoFinder output from all 47 species
Dde_g11180 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.03 OrthoFinder output from all 47 species
GSVIVT01001841001 No alias Prohibitin-3, mitochondrial OS=Arabidopsis thaliana 0.13 OrthoFinder output from all 47 species
Gb_09762 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.02 OrthoFinder output from all 47 species
LOC_Os04g38900.1 ATPHB3, PHB3,... prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.03 OrthoFinder output from all 47 species
Len_g04612 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.03 OrthoFinder output from all 47 species
Len_g18813 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.03 OrthoFinder output from all 47 species
Len_g23642 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.04 OrthoFinder output from all 47 species
Lfl_g02715 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.04 OrthoFinder output from all 47 species
MA_18599g0010 ATPHB3, PHB3 prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.03 OrthoFinder output from all 47 species
Pir_g01191 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.03 OrthoFinder output from all 47 species
Sam_g13008 No alias component of FtsH3/10 matrix-AAA protease heterodimer &... 0.04 OrthoFinder output from all 47 species
Smo163805 ATPHB3, PHB3 Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
Solyc11g010190.1.1 ATPHB3, PHB3,... prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.08 OrthoFinder output from all 47 species
Spa_g12804 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.11 OrthoFinder output from all 47 species
Tin_g05866 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.04 OrthoFinder output from all 47 species
Zm00001e041021_P001 ATPHB3, PHB3,... prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 32 210
No external refs found!