1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00079p00069130

AMTR_s00079p00069130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.23

No description available


Gene families : OG0001095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001095_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00069130

Target Alias Description ECC score Gene Family Method Actions
AT1G13380 No alias Protein of unknown function (DUF1218) 0.05 OrthoFinder output from all 47 species
AT3G15480 No alias Protein of unknown function (DUF1218) 0.02 OrthoFinder output from all 47 species
Adi_g021287 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Adi_g046556 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Adi_g046557 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
LOC_Os07g27810.1 LOC_Os07g27810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g10910.3 LOC_Os09g10910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g00422 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Zm00001e022278_P001 Zm00001e022278 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031046_P002 Zm00001e031046 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039835_P001 Zm00001e039835 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR009606 DEAL/Modifying_wall_lignin1/2 62 159
No external refs found!