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  5. AMTR_s00079p00027120

AMTR_s00079p00027120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.5

No description available


Gene families : OG0002406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002406_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00027120
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Ehy_g02636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011906001 No alias No description available 0.1 OrthoFinder output from all 47 species
MA_102552g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10314153g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1124628g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_1206g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_131385g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1441g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_15308g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_179350g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_380151g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_414111g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_82890g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_894565g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9111833g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g09111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g009520.2.1 Solyc05g009520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017019_P001 Zm00001e017019 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!