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  5. AMTR_s00078p00160770

AMTR_s00078p00160770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.146

Description : protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001966_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00160770

Target Alias Description ECC score Gene Family Method Actions
AT3G18420 No alias Protein prenylyltransferase superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G53560 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g10046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G016800.1 Ceric.04G016800 not classified & original description: pacid=50631515... 0.03 OrthoFinder output from all 47 species
Ceric.39G053400.1 Ceric.39G053400 not classified & original description: pacid=50583310... 0.04 OrthoFinder output from all 47 species
GSVIVT01025601001 No alias protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_41698 No alias protein SLOW GREEN 1, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10432896g0010 No alias protein SLOW GREEN 1, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g20344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g008160.4.1 Solyc01g008160 protein SLOW GREEN 1, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc09g005740.3.1 Solyc09g005740 protein SLOW GREEN 1, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!