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  5. AMTR_s00078p00129180

AMTR_s00078p00129180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.106

No description available


Gene families : OG0008660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00129180

Target Alias Description ECC score Gene Family Method Actions
AT5G62550 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
Ala_g32687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27700.t1 Aspi01Gene27700 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G020000.1 Ceric.20G020000 not classified & original description: pacid=50567534... 0.07 OrthoFinder output from all 47 species
Dac_g07000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008044001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_27466 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_30698 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g17960.1 LOC_Os03g17960 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g38960.1 LOC_Os06g38960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g35094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_49755g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Nbi_g06283 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g41481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g070970.3.1 Solyc06g070970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g07115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11921 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e037392_P002 Zm00001e037392 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!