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  5. AMTR_s00078p00125860

AMTR_s00078p00125860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.102

Description : Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis


Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00125860

Target Alias Description ECC score Gene Family Method Actions
Cba_g04653 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os06g05250.2 LOC_Os06g05250 Translation factor GUF1 homolog, mitochondrial OS=Oryza... 0.04 OrthoFinder output from all 47 species
Mp3g15370.1 No alias Translation factor GUF1 homolog, mitochondrial... 0.02 OrthoFinder output from all 47 species
Nbi_g10787 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g058880.4.1 Solyc03g058880 Translation factor GUF1 homolog, mitochondrial... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004725 protein tyrosine phosphatase activity IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR013842 LepA_CTD 197 303
IPR000640 EFG_V-like 110 195
No external refs found!