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  5. AMTR_s00078p00099060

AMTR_s00078p00099060 (ATHIR1, HIR1,...)


Aliases : ATHIR1, HIR1, evm_27.TU.AmTr_v1.0_scaffold00078.69

Description : Hypersensitive-induced response protein 1 OS=Arabidopsis thaliana


Gene families : OG0000609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00099060
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT5G62740 ATHIR1, HIR1 SPFH/Band 7/PHB domain-containing membrane-associated... 0.02 OrthoFinder output from all 47 species
Aop_g12519 ATHIR1, HIR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G099400.1 ATHIR1, HIR1,... not classified & original description: pacid=50592454... 0.02 OrthoFinder output from all 47 species
Dac_g04560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g40580.1 ATHIR1, HIR1,... Hypersensitive-induced response protein 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51420.1 ATHIR1, HIR1,... Hypersensitive-induced response protein-like protein 1... 0.02 OrthoFinder output from all 47 species
Nbi_g04157 ATHIR1, HIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63630 ATHIR1, HIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 9 182
No external refs found!