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  5. AMTR_s00078p00046140

AMTR_s00078p00046140 (FBL6, EBF1,...)


Aliases : FBL6, EBF1, evm_27.TU.AmTr_v1.0_scaffold00078.21

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.EBF component


Gene families : OG0001670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00046140
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00189050 FBL6, EBF1,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Aop_g12930 FBL6, EBF1 substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38507.t1 FBL6, EBF1,... substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g05913 FBL6, EBF1 substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g05948 FBL6, EBF1 substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g02835 No alias substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01015548001 FBL6, EBF1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os02g10700.1 EBF2, LOC_Os02g10700 EBF-type ethylene signal transducer. component EBF of... 0.03 OrthoFinder output from all 47 species
LOC_Os06g40360.1 FBL6, EBF1,... EBF-type ethylene signal transducer. component EBF of... 0.03 OrthoFinder output from all 47 species
Pir_g28541 FBL6, EBF1 substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g07273 EBF2 substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Solyc05g008700.3.1 Solyc05g008700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g009560.2.1 EBF2, Solyc12g009560 EBF-type ethylene signal transducer. component EBF of... 0.03 OrthoFinder output from all 47 species
Zm00001e030581_P001 FBL6, EBF1,... EBF-type ethylene signal transducer. component EBF of... 0.04 OrthoFinder output from all 47 species
Zm00001e037419_P001 FBL6, EBF1,... EBF-type ethylene signal transducer. component EBF of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 65 100
No external refs found!